LiuLab-Bioelectronics-Harvard/STAgent

STAgent is a multimodal LLM-based AI agent that enables deep research about spatial transcriptomics data

44
/ 100
Emerging

STAgent helps spatial transcriptomics researchers analyze complex `.h5ad` datasets to uncover biological insights. You input your spatial transcriptomics data and research questions, and it outputs detailed analyses, visualizations, and research reports. This tool is designed for scientists, biologists, and researchers working with spatial gene expression data who want to accelerate their discovery process.

No commits in the last 6 months.

Use this if you need an interactive, AI-guided assistant to streamline your spatial transcriptomics data analysis, from preprocessing to biological interpretation and report generation.

Not ideal if you primarily work with non-spatial gene expression data or require highly specialized, custom scripting beyond the scope of guided AI workflows.

spatial-transcriptomics genomics-research biological-data-analysis biomedical-discovery tissue-phenotyping
Stale 6m No Package No Dependents
Maintenance 2 / 25
Adoption 8 / 25
Maturity 16 / 25
Community 18 / 25

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Stars

50

Forks

12

Language

Python

License

MIT

Last pushed

May 25, 2025

Commits (30d)

0

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