PubChem-MCP-Server and PDB-MCP-Server
These two MCP servers are complements, with PubChem-MCP-Server providing access to a broad chemical database and PDB-MCP-Server focusing on the 3D structures of biomolecules, allowing for integrated analyses of small molecules and macromolecules within a modeling context.
About PubChem-MCP-Server
Augmented-Nature/PubChem-MCP-Server
A comprehensive Model Context Protocol (MCP) server for accessing the PubChem chemical database. This server provides access to over 110 million chemical compounds with extensive molecular properties, bioassay data, and chemical informatics tools.
This tool helps chemists, biologists, and materials scientists quickly find and analyze chemical compounds from the extensive PubChem database. You can input compound names, formulas, or structures (like SMILES strings) and receive detailed information on molecular properties, biological activities, safety data, and even 3D structures. It's designed for researchers needing rapid access to comprehensive chemical information for drug discovery, material science, or chemical safety assessments.
About PDB-MCP-Server
Augmented-Nature/PDB-MCP-Server
A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.
This project helps researchers and scientists quickly find and access 3D structural information about proteins, nucleic acids, and complex biological assemblies from the Protein Data Bank (PDB). You can input keywords, protein names, or PDB IDs to get detailed structure information, quality metrics, and downloadable files. It's designed for structural biologists, biochemists, and computational biologists who work with molecular structures.
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