Image Segmentation Tools

Tools for detecting, extracting, and partitioning objects or regions within images and 3D volumetric data using instance, semantic, or panoptic segmentation. Does NOT include general object detection, classification-only approaches, or non-segmentation computer vision tasks like pose estimation or face recognition.

There are 18 image segmentation tools tracked. 14 score above 50 (established tier). The highest-rated is PytorchConnectomics/pytorch_connectomics at 62/100 with 192 stars.

Get all 18 projects as JSON

curl "https://pt-edge.onrender.com/api/v1/datasets/quality?domain=computer-vision&subcategory=image-segmentation-tools&limit=20"

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#	Tool	Score	Tier	Stars	Language
1	PytorchConnectomics/pytorch_connectomics PyTorch Connectomics: segmentation toolbox for EM connectomics	62	Established	192	Python
2	segments-ai/segments-ai Segments.ai Python SDK	62	Established	26	Python
3	afermg/cp_measure Morphological features from images and masks made easy.	62	Established	43	Python
4	oarriaga/paz Hierarchical perception library in Python for pose estimation, object...	61	Established	702	Python
5	JdeRobot/PerceptionMetrics A toolkit designed to unify and streamline the evaluation of object...	61	Established	93	Python
6	kreshuklab/panseg A tool for cell instance aware segmentation in densely packed 3D volumetric images	60	Established	124	Python
7	heyoeyo/muggled_sam Muggled SAM: Segmentation without the magic	56	Established	208	Python
8	NatLabRockies/Panel-Segmentation This open-source package provides a framework for automatically detecting...	55	Established	40	Python
9	orthoseg/orthoseg Train your own neural networks to segment orthophotos.	55	Established	45	Python
10	kadirnar/segment-anything-video MetaSeg: Packaged version of the Segment Anything repository	55	Established	984	Python
11	kreshuklab/plant-seg A tool for cell instance aware segmentation in densely packed 3D volumetric images	53	Established	124	Python
12	Imageomics/bioclip-2 Repository for the BioCLIP 2 model project. [NeurIPS'25 Spotlight] BioCLIP 2...	51	Established	55	Python
13	Sanofi-Public/MIPHEI-ViT MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models	50	Established	35	Python
14	NVIDIA-ISAAC-ROS/isaac_ros_image_segmentation NVIDIA-accelerated, deep learned semantic image segmentation	50	Established	118	C++
15	ChenyunWu/PhraseCutDataset Dataset API for "PhraseCut: Language-based Image Segmentation in the Wild"	44	Emerging	113	Jupyter Notebook
16	sohmandal/classpose A foundation model-driven whole slide image-scale cell phenotyping method...	37	Emerging	20	Python
17	leehyeonbeen/segment-anything-fine-tuning Fine-tuning SAM using PASCAL VOC dataset	35	Emerging	19	Jupyter Notebook
18	Istituto-Mario-Negri-Medical-Imaging/CYSTSCAN-PKD Automated cyst segmentation and counting pipeline for polycystic kidney...	26	Experimental	7	Python

Comparisons in this category

panseg and plant-seg (60 vs 53)