kirkegaardlab/deeptangle
[Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data
This tool helps biologists and researchers rapidly find and track very thin, dense biological structures—like worms or neurons—within high-resolution microscopy images. It takes raw microscope image data as input and outputs precise locations and movement paths of these structures, even when they are tightly packed or overlapping. This is ideal for scientists studying the behavior and dynamics of microscopic organisms or cellular components.
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Use this if you need to accurately identify and follow slender biological objects in crowded microscopy datasets.
Not ideal if you are working with low-density images or need to analyze structures that are not slender bodies.
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Language
Python
License
MIT
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Last pushed
Aug 30, 2024
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