TuftsBCB/RegDiffusion
Diffusion model for gene regulatory network inference.
This tool helps computational biologists and bioinformaticians quickly identify how genes regulate each other. You input single-cell RNA sequencing data, and it outputs a list of predicted gene regulatory links. It's designed for researchers working with large genetic datasets who need to understand gene interactions.
Available on PyPI.
Use this if you need to rapidly infer gene regulatory networks from large single-cell RNA-seq data, even with tens of thousands of genes, and want a list of biologically relevant connections.
Not ideal if you are working with small, well-characterized gene networks or if your primary interest is not in gene regulation from single-cell transcriptomics.
Stars
28
Forks
5
Language
Python
License
Apache-2.0
Category
Last pushed
Feb 21, 2026
Commits (30d)
0
Dependencies
8
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