Rostlab/VESPA
VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5.
This tool helps researchers in molecular biology predict the impact of single amino acid changes on protein function. You provide a protein sequence (or multiple sequences) in FASTA format, and it outputs a score for every possible single amino acid substitution, indicating its likely effect. This is designed for scientists studying protein function, genetic mutations, or disease mechanisms.
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Use this if you need to quickly assess the potential functional consequences of specific single amino acid variants in your protein sequences without requiring extensive alignments or prior experimental data.
Not ideal if you need to predict the effects of complex mutations involving multiple amino acids or require predictions based on protein structural information.
Stars
34
Forks
9
Language
Python
License
AGPL-3.0
Category
Last pushed
Mar 04, 2024
Commits (30d)
0
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curl "https://pt-edge.onrender.com/api/v1/quality/embeddings/Rostlab/VESPA"
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