haesleinhuepf/bia-bob

BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.

47
/ 100
Emerging

This tool helps bio-image analysts automate repetitive or complex image analysis tasks. You describe your desired image analysis steps in plain language, and it generates Python code and Jupyter notebooks to process your image data. This is for scientists, researchers, or lab technicians working with microscopy or other biological image data who need to analyze images efficiently.

130 stars. No commits in the last 6 months. Available on PyPI.

Use this if you need to quickly generate or modify Python code for bio-image analysis workflows, want to explore different analysis strategies, or need help understanding or debugging existing code.

Not ideal if you are working with sensitive, confidential, or personal data, as your prompts and potentially data content are sent to third-party AI services.

bio-image analysis microscopy image processing life sciences research scientific computing
Stale 6m
Maintenance 2 / 25
Adoption 10 / 25
Maturity 25 / 25
Community 10 / 25

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Stars

130

Forks

9

Language

Python

License

BSD-3-Clause

Last pushed

Aug 07, 2025

Commits (30d)

0

Dependencies

11

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