HKU-BAL/Clair3-RNA
Clair3-RNA - a long-read small variant caller for RNA sequencing data
This project helps molecular biologists and geneticists pinpoint small genetic variations (like single letter changes or small insertions/deletions) within RNA sequencing data. You provide raw or aligned long-read RNA sequencing data from platforms like Oxford Nanopore or PacBio, and it outputs a list of these genetic variants. Researchers studying gene expression, RNA editing, or disease mechanisms will find this tool useful.
Use this if you need to accurately identify small genetic variants from long-read RNA sequencing data.
Not ideal if you are looking for germline variants from DNA sequencing or somatic variants from tumor-only DNA samples.
Stars
40
Forks
6
Language
Python
License
BSD-3-Clause
Category
Last pushed
Dec 23, 2025
Commits (30d)
0
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