HautaniemiLab/histolytics
Interpretable Analysis of Histological WSIs
This tool helps researchers and pathologists analyze whole slide images (WSIs) from tissue samples, which are critical in pathology. It takes a digital image of a tissue slide as input and automatically identifies and outlines different cell types and tissue structures. The output is a detailed map of the slide's cellular composition and spatial organization, providing insights for cancer research, diagnostics, and understanding disease mechanisms.
Available on PyPI.
Use this if you need to precisely identify cells and tissue structures within large whole slide images and analyze their spatial relationships for research or diagnostic purposes.
Not ideal if you are working with non-histological images or require basic, manual image annotation rather than automated spatial analysis.
Stars
15
Forks
—
Language
Python
License
BSD-3-Clause
Category
Last pushed
Jan 30, 2026
Commits (30d)
0
Dependencies
16
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