Kuanhao-Chao/splam
✂️ Deep learning-based splice site predictor that improves spliced alignments
Splam is a deep learning-based tool that evaluates and cleans up spurious splice junctions in RNA-Seq data. It takes DNA sequences around donor and acceptor sites as input and outputs improved alignment files or evaluated annotation files. This helps scientists and researchers in genomics to get more accurate results from their RNA-Seq analyses.
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Use this if you are analyzing RNA-Seq data and need to ensure the accuracy of splice junctions in your alignment or annotation files.
Not ideal if your workflow does not involve RNA-Seq data analysis or the evaluation of gene splice sites.
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Language
C++
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Last pushed
Feb 26, 2025
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0
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