LLeon360/UNetBiomedicalDiagnosis

Contains a module for functions that build and evaluate a U-Net Model which is a modified auto-encoder image-to-image architecture that includes skip connections from encoder to decoder layers with matching input dimensions to retain features from the encoded image. The model is designed for image segmentation and produces a mask based off x-ray data. The model is used with lung x-rays to segment out lungs, brain scans to segment out brain tumors, and pictures of a room to segment out a human figure. With the lungs dataset, it is able to manage 98% accuracy with a wide range of 3,4,5 encoding block of Conv2D and MaxPooling and BatchNormalization + 1 latent layer without pooling and the mirrored number of decoding layers that do Conv2DTranspose for deconvolution and UpScaling to reverse MaxPooling making 7,9,11 layers with doubling filters/kernels in each encoding block from 16,32,64,80 that double with each block like in a traditional CNN and then half with each decoding block.

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This tool helps medical professionals, researchers, and AI developers analyze medical images by precisely outlining specific features like lungs on X-rays or tumors on brain scans. You input an image, and it outputs a segmented mask highlighting the areas of interest. It's designed for anyone working with biomedical imaging who needs to isolate anatomical structures or abnormalities with high accuracy.

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Use this if you need to automatically segment and delineate specific regions within medical images, such as identifying lungs from chest X-rays or tumors in brain scans.

Not ideal if you only need a general classification of an image without detailed segmentation, or if your primary focus is on non-biomedical image analysis.

medical-imaging radiology image-segmentation biomedical-research diagnostic-support
Stale 6m No Package No Dependents
Maintenance 0 / 25
Adoption 4 / 25
Maturity 16 / 25
Community 13 / 25

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Stars

8

Forks

2

Language

Python

License

GPL-3.0

Last pushed

Jun 07, 2024

Commits (30d)

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