MASILab/cornn_tractography
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
This project helps neuroscientists and radiologists generate detailed maps of brain connections, known as tractograms, using only standard T1-weighted MRI scans. Traditionally, this requires specialized diffusion MRI, but this tool streamlines the process. You input a T1-weighted MRI scan along with related brain and white matter segmentations, and it outputs a tractogram showing neural pathways.
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Use this if you need to perform brain tractography for research or clinical evaluation but lack diffusion MRI data, or want to explore new methods for understanding brain connectivity from readily available T1-weighted scans.
Not ideal if your primary goal is highly validated, gold-standard clinical tractography where diffusion MRI is the established and preferred method.
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Python
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Last pushed
Aug 06, 2025
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