gao-lab/SLAT
Spatial-Linked Alignment Tool
This tool helps researchers analyze and compare different layers or slices of single-cell spatial omics data by aligning them. It takes in spatial omics data from various slices and outputs an integrated, aligned dataset, allowing scientists to understand how cell types and gene expressions are organized across tissue samples. Researchers in biology and medicine who work with spatial omics data will find this useful for their investigations.
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Use this if you need to precisely align and integrate single-cell spatial omics data from multiple tissue slices to understand cellular relationships and patterns across your samples.
Not ideal if you are working with non-spatial single-cell data or if your primary need is data visualization without complex alignment.
Stars
90
Forks
9
Language
Python
License
MIT
Category
Last pushed
Dec 20, 2024
Commits (30d)
0
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