google/deepsomatic
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.
This tool helps researchers and clinicians accurately find somatic variants from patient tumor and normal tissue sequencing data. It takes aligned DNA sequencing reads and uses deep learning to identify genetic mutations specific to the tumor, producing a standard VCF or gVCF file listing these variants. Cancer researchers and clinical geneticists would use this to understand tumor genetics.
296 stars.
Use this if you need to precisely identify cancer-specific genetic mutations from tumor-normal or tumor-only DNA sequencing data.
Not ideal if you are looking for germline (inherited) variants or a tool for general genomic analysis unrelated to somatic mutations.
Stars
296
Forks
46
Language
—
License
BSD-3-Clause
Category
Last pushed
Mar 05, 2026
Commits (30d)
0
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