jiazhao97/INSPIRE
INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources
INSPIRE helps researchers analyze multiple spatial transcriptomics datasets together, even if they come from different sources or technologies. It takes gene expression counts and spatial coordinates from tissue sections as input, producing insights into cell populations, tissue architecture, and gene programs. This tool is for biologists, pathologists, and geneticists studying tissue organization and cellular processes.
Use this if you need to combine and interpret spatial transcriptomics data from several tissue samples, different experimental conditions, or varying technologies to get a comprehensive view.
Not ideal if you are working with only a single spatial transcriptomics dataset and do not require multi-dataset integration or comparison.
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8
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4
Language
Python
License
—
Category
Last pushed
Jan 21, 2026
Commits (30d)
0
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