jonathanking/protein-transformer
Predicting protein structure through sequence modeling
This project helps structural biologists and biochemists predict the complete 3D structure of a protein, including all atom positions, directly from its amino acid sequence. You provide the protein's sequence data, and the system outputs a predicted 3D atomic structure. It is designed for researchers exploring novel methods for protein structure prediction.
112 stars. No commits in the last 6 months.
Use this if you are a researcher in structural biology or biochemistry interested in experimenting with advanced deep learning models (specifically Transformer-based architectures) for de novo protein structure prediction.
Not ideal if you need a user-friendly, out-of-the-box solution for high-throughput protein structure prediction or if you are not comfortable working with command-line tools and machine learning frameworks.
Stars
112
Forks
17
Language
Jupyter Notebook
License
BSD-3-Clause
Category
Last pushed
May 04, 2020
Commits (30d)
0
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