lkytal/PepNet
The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra
This tool helps analytical scientists like proteomics researchers rapidly determine the exact amino acid sequence of peptides. By inputting tandem mass spectra data, it automatically outputs the peptide sequence and associated confidence scores. This is specifically useful for those analyzing unmodified HCD spectra of certain charge states.
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Use this if you need to quickly and accurately identify peptide sequences from tandem mass spectrometry data without prior knowledge of the peptides.
Not ideal if your peptides have modifications beyond a fixed carbamidomethyl on C, or if you need to sequence peptides longer than 30 amino acids.
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Language
Python
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Last pushed
Oct 30, 2024
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