modernatx/seqlike
Unified biological sequence manipulation in Python
This tool simplifies working with DNA, RNA, and amino acid sequences for computational biologists and bioinformaticians. You can input various biological sequence data types, like strings or Biopython objects, and get consistently formatted sequences that are easy to manipulate, convert between types (e.g., DNA to amino acid), and prepare for machine learning models or visualizations. It's designed for researchers who frequently process and analyze biological sequences.
208 stars. No commits in the last 6 months. Available on PyPI.
Use this if you are a computational biologist or bioinformatician who needs a flexible and unified way to handle different types of biological sequences (DNA, RNA, proteins) and interconvert between them for analysis or machine learning tasks.
Not ideal if your primary need is basic sequence storage or simple parsing without complex manipulation or interconversion requirements.
Stars
208
Forks
21
Language
Python
License
Apache-2.0
Category
Last pushed
Jun 12, 2024
Commits (30d)
0
Dependencies
9
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