saeyslab/FlowSOM_Python
The complete FlowSOM package known from R, now available in Python!
This tool helps immunologists and oncologists analyze complex flow cytometry data. It takes your raw flow cytometry files (FCS) and automatically groups similar cells together, then visually displays these cell populations. This allows researchers to quickly identify and understand different cell types within their samples, which is crucial for insights in fields like immunology and oncology.
Use this if you need to identify distinct cell populations from large flow cytometry datasets without prior knowledge of what you're looking for.
Not ideal if you already have pre-defined cell populations you want to quantify or if you only need basic statistical analysis of your cytometry data.
Stars
27
Forks
6
Language
Python
License
GPL-3.0
Category
Last pushed
Mar 09, 2026
Commits (30d)
0
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