stardist/stardist-napari
StarDist plugin for napari
This tool helps biologists and researchers automatically find and outline densely packed cells or other objects in microscopy images, even in difficult cases with low contrast. You provide an image with cells, and it outputs a precise segmentation of each individual cell or object. It's designed for anyone working with biological image analysis who needs to accurately quantify or study individual objects within complex images.
No commits in the last 6 months. Available on PyPI.
Use this if you need to precisely segment individual, often densely packed, star-convex shaped objects like cell nuclei in 2D or 3D microscopy images.
Not ideal if your primary goal is general object detection for non-biological images or if your objects are not roughly star-convex in shape.
Stars
39
Forks
10
Language
Python
License
BSD-3-Clause
Category
Last pushed
Aug 24, 2024
Commits (30d)
0
Dependencies
6
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