yugantgajera/Dilated-Inception-U-Net-for-Nuclei-Segmentation-in-Multi-Organ-Histology-Images

Medical image processing using machine learning is an emerging field of study which involves making use of medical image data and drawing valuable inferences out of them. Segmentation of any body of interest from a medical image can be done automatically using machine learning algorithms. Deep learning has been proven effective in the segmentation of any entity of interest from its surroundings such as brain tumors, lesions, cysts, etc which helps doctors diagnose several diseases. In several medical image segmentation tasks, the U-Net model achieved impressive performance. In this study, a Dilated Inception U-Net model is employed to effectively generate feature sets over a broad region on the input in order to segment the compactly packed and clustered nuclei in the Molecular Nuclei Segmentation dataset that contains H&E histopathology pictures. A comprehensive review of published work based on deep learning on this dataset has also been exhibited.

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This project helps pathologists and medical researchers automatically identify and outline individual cell nuclei in H&E stained histopathology images. You input digital microscope images, and it outputs precise segmentations of nuclei, even when they are densely packed and clustered. This is ideal for medical professionals and researchers who analyze tissue samples for diagnosis or study.

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Use this if you need to accurately segment individual nuclei from complex, multi-organ histopathology images to aid in diagnosis or research.

Not ideal if you are working with non-histopathology medical images or need to segment other structures besides nuclei.

histopathology nuclei-segmentation medical-imaging pathology-diagnosis tissue-analysis
No License Stale 6m No Package No Dependents
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Oct 28, 2022

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