ElliotXie/CASSIA
CASSIA: A multiagent llm based single cell Annottaion framework
CASSIA helps biologists, medical researchers, and bioinformaticians accurately identify cell types from single-cell RNA sequencing data. It takes your raw or processed marker gene data, along with tissue and species information, and uses advanced AI to produce precise, interpretable cell type annotations. This enhances the understanding of complex biological samples and disease mechanisms.
Use this if you need to reliably annotate cell types in your single-cell transcriptomics experiments and want to leverage AI for improved accuracy and speed.
Not ideal if your work does not involve single-cell analysis or if you prefer manual, expert-driven annotation without AI assistance.
Stars
85
Forks
6
Language
Python
License
MIT
Category
Last pushed
Feb 07, 2026
Commits (30d)
0
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