All Scientific ML Tools

123 libraries ranked by quality score

Showing 1–100 of 123

#	Library	Score	Tier	Category	Stars	Language
1	jobovy/galpy Galactic Dynamics in python	81	Verified	—	268	Python
2	AMReX-Codes/amrex AMReX: Software Framework for Block Structured AMR	76	Verified	—	733	C++
3	stdlib-js/stdlib ✨ The fundamental numerical library for JavaScript and TypeScript. ✨	76	Verified	—	5,795	JavaScript
4	pymovements/pymovements A python package for processing eye movement data	76	Verified	—	134	Python
5	chapel-lang/chapel a Productive Parallel Programming Language	76	Verified	—	1,981	Chapel
6	dealii/dealii The development repository for the deal.II finite element library	76	Verified	—	1,649	C++
7	InsightSoftwareConsortium/ITK Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven,...	76	Verified	—	1,584	C++
8	scipy/scipy SciPy library main repository	76	Verified	—	14,590	Python
9	opendatacube/datacube-core Open Data Cube analyses continental scale Earth Observation data through time	76	Verified	—	571	Python
10	trilinos/Trilinos Primary repository for the Trilinos Project	76	Verified	—	1,374	C++
11	BOINC/boinc Open-source software for volunteer computing and grid computing.	76	Verified	—	2,373	PHP
12	spack/spack A flexible package manager that supports multiple versions, configurations,...	76	Verified	—	4,992	Python
13	OpenChemistry/avogadrolibs Avogadro libraries provide 3D rendering, visualization, analysis and data...	76	Verified	—	614	C++
14	mfem/mfem Lightweight, general, scalable C++ library for finite element methods	74	Verified	—	2,143	C++
15	opensim-org/opensim-core SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.	74	Verified	—	1,013	C++
16	visit-dav/visit VisIt - Visualization and Data Analysis for Mesh-based Scientific Data	74	Verified	—	513	C
17	optiland/optiland Comprehensive optical design, optimization, and analysis in Python,...	74	Verified	—	634	Python
18	regionmask/regionmask create masks of geospatial regions for arbitrary grids	73	Verified	—	259	Python
19	llnl/sundials Official development repository for SUNDIALS - a SUite of Nonlinear and...	71	Verified	—	644	C
20	adtzlr/felupe finite element analysis for continuum mechanics of solid bodies	70	Verified	—	171	Python
21	goplus/xgo XGo is a programming language that reads like plain English. But it's also...	69	Established	—	9,415	Go
22	shadow/shadow Shadow is a discrete-event network simulator that directly executes real...	69	Established	—	1,685	Rust
23	K-Dense-AI/scientific-agent-skills A set of ready to use Agent Skills for research, science, engineering,...	69	Established	—	18,028	Python
24	biotite-dev/biotite A comprehensive library for computational molecular biology	68	Established	—	937	Python
25	simpeg/simpeg Simulation and Parameter Estimation in Geophysics - A python package for...	67	Established	—	630	Python
26	usnistgov/fipy FiPy is a Finite Volume PDE solver written in Python	67	Established	—	608	Python
27	andykee/lentil Heart-healthy physical optics	65	Established	—	19	Python
28	openhpc/ohpc OpenHPC Integration, Packaging, and Test Repo	64	Established	—	977	C
29	geoschem/geos-chem GEOS-Chem "Science Codebase" repository. Contains GEOS-Chem science...	64	Established	—	227	Fortran
30	inducer/pyopencl OpenCL integration for Python, plus shiny features	64	Established	—	1,132	Python
31	scikit-bio/scikit-bio scikit-bio: a community-driven Python library for bioinformatics, providing...	64	Established	—	1,188	Python
32	espressomd/espresso The ESPResSo package	64	Established	—	266	C++
33	MFlowCode/MFC Exascale multiphase flow solver — 2025 Gordon Bell Prize Finalist \| 200T...	64	Established	—	352	Fortran
34	gem/oq-engine OpenQuake Engine: a software for Seismic Hazard and Risk Analysis	64	Established	—	430	Python
35	mumax/3 GPU-accelerated micromagnetic simulator	64	Established	—	491	Go
36	spack/spack-packages Spack's community package recipes	64	Established	—	125	Python
37	yt-project/yt Main yt repository	64	Established	—	546	Python
38	meteoinfo/MeteoInfo MeteoInfo: GIS, scientific computation and visualization environment.	63	Established	—	362	Java
39	inducer/meshpy 2D/3D simplicial mesh generator interface for Python (Triangle, TetGen, gmsh)	63	Established	—	577	C++
40	ucscGenomeBrowser/kent UCSC Genome Browser source. "beta" is released version / "master" is testing.	63	Established	—	261	C
41	betterscientificsoftware/bssw.io Better Scientific Software Homepage	63	Established	—	146	Python
42	pacs-course/pacs-examples The examples for the course on advanced programming for scientific computing...	62	Established	—	52	Shell
43	Alpine-DAV/ascent A flyweight in situ visualization and analysis runtime for multi-physics HPC...	62	Established	—	240	C++
44	gnudatalanguage/gdl GDL - GNU Data Language	62	Established	—	306	C++
45	SCIInstitute/SCIRun SCIRun is a Problem Solving Environment, for modeling, simulation and...	62	Established	—	137	C++
46	JuDFTteam/best-of-atomistic-machine-learning 🏆 A ranked list of awesome atomistic machine learning projects ⚛️🧬💎.	62	Established	—	638	—
47	feelpp/feelpp :gem: Feel++: Finite Element Embedded Language and Library in C++	62	Established	—	327	C++
48	llnl/SAMRAI Structured Adaptive Mesh Refinement Application Infrastructure - a scalable...	62	Established	—	242	C++
49	openmole/openmole Workflow engine for exploration of simulation models using high throughput computing	61	Established	—	152	Scala
50	pism/pism Parallel Ice Sheet Model (PISM)	61	Established	—	119	C++
51	mccode-dev/McCode The home of the McStas (neutrons) and McXtrace (x-rays) Monte-Carlo...	60	Established	—	90	Fortran
52	molmod/stacie Stable AutoCorrelation Integral Estimator	60	Established	—	17	Python
53	PDLPorters/pdl Scientific computing with Perl	60	Established	—	102	Perl
54	gonum/gonum Gonum is a set of numeric libraries for the Go programming language. It...	60	Established	—	8,345	Go
55	glotzerlab/freud Powerful, efficient particle trajectory analysis in scientific Python.	59	Established	—	319	C++
56	amberbiology/scribl Semantic Capture of Relationships In Biological Literature (scribl)	58	Established	—	5	Python
57	deepcharles/ruptures ruptures: change point detection in Python	58	Established	—	2,016	Python
58	gdtk-uq/gdtk The Gas Dynamics Toolkit (GDTk) is a set of software tools for simulating...	58	Established	—	105	D
59	martinjrobins/diffsol ODE solver library in Rust	58	Established	—	108	Rust
60	vlang/vsl V library to develop Artificial Intelligence and High-Performance Scientific...	57	Established	—	393	V
61	SciCompMod/memilio Modular spatio-temporal models for epidemic and pandemic simulations	57	Established	—	67	C++
62	nelson-lang/nelson The Nelson Programming Language	57	Established	—	123	C++
63	scientific-python/scientific-python.org Source for the Scientific Python Project homepage.	57	Established	—	40	HTML
64	gjbex/Scientific-C-plus-plus Repository for participants of the "Scientific C++" training	56	Established	—	46	C++
65	goplus/ixgo The Go/XGo Interpreter	55	Established	—	139	Go
66	wwang721/pyafv 🧬 Python code that implements the active finite Voronoi (AFV) model.	54	Established	—	21	Python
67	InSARdev/core Interferometric Synthetic Aperture Radar (InSAR) processing ecosystem for Python	54	Established	—	46	Python
68	sun-data/named-arrays Python library that implements named tensors with Astropy Quantity support.	53	Established	—	5	Python
69	ISSMteam/PINNICLE A general PINN framework for solving ice sheet modeling	53	Established	—	34	Python
70	OstapHEP/ostap User friendly and more intuitive interface to ROOT and PyROOT	53	Established	—	18	C
71	DataLab-Platform/DataLab Open-source Platform for Scientific and Technical Data Processing and Visualization	53	Established	—	88	Python
72	tsotchke/eshkol High-Performance LISP-like language for Scientific Computing and AI written in C++	53	Established	—	99	C++
73	abougouffa/minemacs MinEmacs: an Emacs configuration framework for daily use	53	Established	—	199	Emacs Lisp
74	mia-jinns/jinns Physics Informed Neural Networks (PINNs) + SPINNs + HyperPINNs + Adaptative...	53	Established	—	46	Jupyter Notebook
75	earth-system-radiation/pyRTE-RRTMGP Python interface to the RTE+RRTMGP Fortran software package	52	Established	—	16	Python
76	sinanislekdemir/payton Payton! Kickstart any 3D OpenGL + GTK Ideas in a few seconds!	52	Established	—	53	Python
77	sjdv1982/seamless Wrap Python functions and shell commands as content-addressed...	51	Established	—	20	Shell
78	cpmech/russell Rust Scientific Libary. ODE and DAE (Runge-Kutta) solvers. Special functions...	51	Established	—	181	Rust
79	Autostronomy/AstroPhot A fast, flexible, full featured, and differentiable astronomical image 2D...	50	Established	—	102	Python
80	sarisabban/Pose A bare metal Python library for building and manipulating protein molecular...	50	Established	—	19	Python
81	PyAutoLabs/PyAutoArray Array and grid manipulation for the PyAuto ecosystem	50	Established	—	10	Python
82	haddocking/haddock-restraints Generate restraints to be used in HADDOCK	50	Established	—	6	Rust
83	RESTGroup/rstsr An n-dimensional rust tensor library	50	Established	—	54	Rust
84	pathsim/pathview A Python first graphical user interface for PathSim.	49	Emerging	—	68	TypeScript
85	NathalyDM/nath.biohack A community-focused repository dedicated to fostering learning and...	49	Emerging	—	55	Jupyter Notebook
86	inducer/numerics-notes Slides/notes and Jupyter notebook demos for an introductory course of...	48	Emerging	—	62	Jupyter Notebook
87	chaobrain/pinnx Physics-Informed Neural Networks for Scientific Machine Learning in JAX	48	Emerging	—	8	Python
88	c-hydro/hmc-dev Hydrological Model Continuum (HMC) – Open-source distributed hydrological...	47	Emerging	—	4	Fortran
89	alconley/spectrix Interactive 1D/2D histogram fitter and data visualization tool for nuclear...	47	Emerging	—	10	Rust
90	runmat-org/runmat Open-source runtime for math. Write MATLAB syntax, run on CPU + GPU...	47	Emerging	—	203	Rust
91	dadesso17/RJ-PINNs RJ-PINNs, introduced by Dadoyi Dadesso, is a novel framework that...	45	Emerging	—	5	Python
92	equipez/setup_mex This package provides scripts that attempt to facilitate setting up the MATLAB MEX.	45	Emerging	—	4	MATLAB
93	ntumitolab/mmsb-bebi-5009 Mathematical Modeling for Systems Biology	45	Emerging	—	5	Julia
94	stdlib-js/www-status Uptime and status monitor for the stdlib website.	45	Emerging	—	5	Markdown
95	scigolib/hdf5 Modern Pure Go implementation of the HDF5 file format	45	Emerging	—	26	Go
96	pasteurlabs/tesseract-core Universal, autodiff-native software components for Simulation Intelligence. 📦	45	Emerging	—	97	Python
97	smec-ethz/bamboost A Python library built for data-management using the HDF5 file format.	44	Emerging	—	6	Python
98	gauravfs-14/awesome-pinns A carefully curated collection of high-quality libraries, projects,...	44	Emerging	—	90	JavaScript
99	JaneliaSciComp/hortacloud HortaCloud - 3D annotation platform for large microscopy data	41	Emerging	—	10	JavaScript
100	Dicklesworthstone/franken_numpy Memory-safe clean-room Rust reimplementation of NumPy with strict/hardened...	40	Emerging	—	4	Python

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