Augmented-Nature/PDB-MCP-Server
A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.
This project helps researchers and scientists quickly find and access 3D structural information about proteins, nucleic acids, and complex biological assemblies from the Protein Data Bank (PDB). You can input keywords, protein names, or PDB IDs to get detailed structure information, quality metrics, and downloadable files. It's designed for structural biologists, biochemists, and computational biologists who work with molecular structures.
Use this if you frequently need to retrieve, examine, or download specific protein or nucleic acid structures and their associated data from the PDB for your research or analysis.
Not ideal if you are looking for protein sequence data or predicted structures, as this focuses on experimentally determined structures from the PDB.
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JavaScript
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Last pushed
Dec 21, 2025
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Get this data via API
curl "https://pt-edge.onrender.com/api/v1/quality/mcp/Augmented-Nature/PDB-MCP-Server"
Open to everyone — 100 requests/day, no key needed. Get a free key for 1,000/day.
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