CelVoxes/ceLLama
Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports
This tool helps immunologists and cell biologists quickly identify cell types within single-cell RNA sequencing datasets. You provide a list of gene markers for different cell clusters, and it uses a local AI model to suggest cell type annotations, generating detailed reports for your analysis. This is designed for researchers who need to annotate cell populations while keeping their data private.
153 stars. No commits in the last 6 months.
Use this if you need to rapidly perform preliminary cell type checks on your single-cell data, prioritize data privacy, and generate comprehensive reports without sending data to external servers.
Not ideal if you prefer manual annotation methods or require extensive human oversight for every cell type identification.
Stars
153
Forks
7
Language
R
License
—
Category
Last pushed
Oct 25, 2024
Commits (30d)
0
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